文件名称：tree2graph:将系统发育树转换为图并将其合并为最终图
文件大小：126KB
文件格式：ZIP
更新时间：2024-03-30 04:13:15
Perl
tree2graph 将系统发育树转换为图并将其合并为最终图 用法： newickTree_2_CytoscapeLink.pl：转换树（newick格式）以链接信息； treeLinks_merge.pl：合并多棵树的链接信息； generate_nodeSize.pl：根据登录和共同祖先的出现次数生成不同大小的节点； 使用Cytoscape可视化图形。
【文件预览】：
tree2graph-main
----tree_files()
--------GJ-tmp.tree(10KB)
--------GJ-adm.tree(3KB)
--------00.tree_files_readme(56B)
--------XI-2B.tree(4KB)
--------O-rufipogon.tree(780B)
--------XI-adm.tree(24KB)
--------cA1.tree(3KB)
--------XI-3B2.tree(3KB)
--------O-barthii.tree(286B)
--------XI-3A.tree(7KB)
--------XI-2A.tree(5KB)
--------cB.tree(3KB)
--------Backbone.tree(7KB)
--------O-glaberrima.tree(315B)
--------admixed.tree(3KB)
--------XI-3B1.tree(10KB)
--------GJ-subtrp.tree(4KB)
--------XI-1A.tree(7KB)
--------cA-adm.tree(1KB)
--------GJ-trop2.tree(2KB)
--------XI-1B2.tree(2KB)
--------XI-1B1.tree(2KB)
--------GJ-trop1.tree(11KB)
--------cA2.tree(3KB)
----generate_nodeSize.pl(736B)
----treeLinks_merge.pl(5KB)
----README.md(423B)
----tree_graphs()
--------XI-1A.tree.link.flt(13KB)
--------GJ-subtrp.tree.link.flt(10KB)
--------GJ-tmp.tree.link.flt(20KB)
--------tree_graph_readme(40B)
--------XI-3B1.tree.link.flt(19KB)
--------graph_merged.size(151KB)
--------GJ-adm.tree.link.flt(6KB)
--------XI-1B2.tree.link.flt(4KB)
--------cA-adm.tree.link.flt(3KB)
--------XI-3A.tree.link.flt(12KB)
--------XI-3B2.tree.link.flt(6KB)
--------GJ-trop1.tree.link.flt(25KB)
--------graph_merged.mergeLink(234KB)
--------cA2.tree.link.flt(4KB)
--------GJ-trop2.tree.link.flt(4KB)
--------O-glaberrima.tree.link.flt(981B)
--------Backbone.tree.link.flt(19KB)
--------O-rufipogon.tree.link.flt(2KB)
--------admixed.tree.link.flt(7KB)
--------graph_merged.sameLUCA(2KB)
--------cA1.tree.link.flt(5KB)
--------O-barthii.tree.link.flt(745B)
--------XI-2B.tree.link.flt(7KB)
--------XI-1B1.tree.link.flt(4KB)
--------XI-adm.tree.link.flt(50KB)
--------cB.tree.link.flt(4KB)
--------XI-2A.tree.link.flt(9KB)
----newickTree_2_CytoscapeLink.pl(3KB)