文件名称：pyPALM：用于处理PALM数据的软件包
文件大小：21.19MB
文件格式：ZIP
更新时间：2024-02-23 23:44:59
localization image-processing image-analysis microscopy LocalizationJupyterNotebook
pyPALM：用于处理PALM数据的软件包
【文件预览】：
pyPALM-master
----_render.pyx(618B)
----notebooks()
--------Grouping Simulations KDE Normal Point Distribution, Random Grouping Chi2 DoFs.pdf(51KB)
--------Grouping aggregation.ipynb(979KB)
--------Grouping Simulations Histogram Normal Point Distribution, Random Grouping.pdf(39KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Uniform Grouping Cumulative B.pdf(139KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Uniform Grouping Cumulative.pdf(125KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Random Grouping Groupsizes.pdf(23KB)
--------Grouping Simulations Histogram Normal Point Distribution, Uniform Grouping Groupsizes.pdf(23KB)
--------Grouping Simulations KDE Uniform Point Distribution, Uniform Grouping Cumulative.pdf(45KB)
--------Grouping Simulations KDE Uniform Point Distribution, Random Grouping Cumulative.pdf(36KB)
--------Grouping Update Algo.ipynb(309KB)
--------Bootstrapping Validation of Aggregation Algorithm.ipynb(2.56MB)
--------Grouping Simulations KDE Normal Point Distribution, Uniform Grouping Cumulative.pdf(46KB)
--------Grouping Simulations KDE Normal Point Distribution, Uniform Grouping Cumulative B.pdf(46KB)
--------Grouping Simulations KDE Normal Point Distribution, Uniform Grouping.pdf(95KB)
--------Grouping Simulations Histogram Normal Point Distribution, Uniform Grouping.pdf(66KB)
--------Grouping Simulations KDE Normal Point Distribution, Uniform Grouping B.pdf(95KB)
--------Aggregation Algorithm Development.ipynb(135KB)
--------Autotune.ipynb(1.59MB)
--------Grouping Simulations Histogram Normal Point Distribution, Random Grouping Chi2 DoFs.pdf(29KB)
--------Grouping Simulations KDE Uniform Point Distribution, Uniform Grouping.pdf(96KB)
--------fish.npz(9KB)
--------Grouping Simulations KDE Uniform Point Distribution, Uniform Grouping Groupsizes.pdf(47KB)
--------Grouping Simulations KDE Normal Point Distribution, Random Grouping Groupsizes.pdf(46KB)
--------Render Test.ipynb(27KB)
--------Cythonizing some funcs.ipynb(133KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Random Grouping Chi2 DoFs.pdf(28KB)
--------Grouping Simulations KDE Uniform Point Distribution, Random Grouping Chi2 DoFs.pdf(51KB)
--------profile.html(13KB)
--------Point Matching testing internal implementation.ipynb(1.47MB)
--------Grouping Simulations KDE Uniform Point Distribution, Uniform Grouping Cumulative B.pdf(46KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Random Grouping Cumulative.pdf(95KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Uniform Grouping.pdf(64KB)
--------Grouping Simulations KDE Normal Point Distribution, Random Grouping Cumulative.pdf(36KB)
--------Grouping Simulations KDE Uniform Point Distribution, Uniform Grouping Chi2 DoFs.pdf(51KB)
--------Point Matching with Real Data Cleaned up Method 1.ipynb(4.5MB)
--------Grouping Simulations Histogram Normal Point Distribution, Uniform Grouping Cumulative B.pdf(137KB)
--------Grouping Simulations Histogram Normal Point Distribution, Random Grouping Groupsizes.pdf(23KB)
--------Render test histogram.ipynb(52KB)
--------Grouping Simulations KDE Uniform Point Distribution, Random Grouping Groupsizes.pdf(47KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Uniform Grouping B.pdf(64KB)
--------Grouping Simulations Histogram Normal Point Distribution, Uniform Grouping B.pdf(64KB)
--------Grouping Simulations Histogram Normal Point Distribution, Uniform Grouping Chi2 DoFs.pdf(26KB)
--------Histogram vs Gaussian Rendering.ipynb(255KB)
--------Point Matching with Real Data Cleaned up.ipynb(5.89MB)
--------Point Matching with Real Data.ipynb(5.02MB)
--------Grouping Simulations Histogram Uniform Point Distribution, Random Grouping.pdf(39KB)
--------Aligning Fiducials.ipynb(621KB)
--------Grouping Simulations KDE Uniform Point Distribution, Random Grouping.pdf(90KB)
--------Grouping Simulations KDE Normal Point Distribution, Uniform Grouping Groupsizes.pdf(47KB)
--------Point Matching pycpd testing.ipynb(2.13MB)
--------PALM+Drift+Correction+Test.ipynb(814KB)
--------Grouping Simulations KDE Uniform Point Distribution, Uniform Grouping B.pdf(96KB)
--------Faster Fiducial Extractor.ipynb(39KB)
--------KDTree vs Gleb Method.ipynb(1.25MB)
--------Grouping Simulations Histogram Normal Point Distribution, Random Grouping Cumulative.pdf(94KB)
--------Comparison.png(77KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Uniform Grouping Groupsizes.pdf(23KB)
--------Automatic Fiducial Finding and Drift Correction Labeled version.ipynb(126KB)
--------Grouping Simulations Histogram Normal Point Distribution, Uniform Grouping Cumulative.pdf(123KB)
--------Automatic Fiducial Finding and Drift Correction.ipynb(788KB)
--------Grouping Simulations KDE Normal Point Distribution, Random Grouping.pdf(90KB)
--------Grouping Simulations Histogram Uniform Point Distribution, Uniform Grouping Chi2 DoFs.pdf(26KB)
--------Grouping Simulations KDE Normal Point Distribution, Uniform Grouping Chi2 DoFs.pdf(51KB)
--------Automatic Alignment and Registration.ipynb(2KB)
----grouping.py(15KB)
----utils.py(6KB)
----palm_utils.py(4KB)
----__init__.py(154B)
----LICENSE.md(10KB)
----drift.py(17KB)
----render.py(28KB)
----registration.py(27KB)
----.gitignore(42B)