文件名称：covarr-de:协变量模型选择，微分和网络表达
文件大小：326KB
文件格式：ZIP
更新时间：2024-03-30 21:36:06
R
Covarr-de 协变量模型选择和差异表达式 该代码库的应用包括
【文件预览】：
covarr-de-master
----common_functions()
--------common_functions.R(43KB)
----HBCC_sgACC_FEATURECOUNTS_GRCh38_CQN.Rmd(28KB)
----MSSM-Penn-Pitt_ACC_DLPFC_FEATURECOUNTS_GRCh38_CQN.Rmd(27KB)
----combined_analysis()
--------combine_all_DLPFC.Rmd(75KB)
--------combine_all_DLPFC_by_celltype.Rmd(58KB)
--------combine_all_data.Rmd(16KB)
--------eval_resid_in_each.Rmd(20KB)
--------plot_diff.networks.Rmd(2KB)
--------combine_all_EPHA1.Rmd(75KB)
--------diff.networks.Rmd(30KB)
--------CTS()
----deconvolution()
--------fans4()
--------example_linking_FANS4_to_bulk.R(2KB)
--------apply_dtangle_FANS4.Rmd(7KB)
----createRelease()
--------create_release_3.1.R(3KB)
----README.md(248B)
----MSSM-Penn-Pitt_DE_DxTissue.Rmd(20KB)
----testing()
--------implementation_prcomp.R(547B)
--------test_CQN_HBCC.Rmd(7KB)
----HBCC_DLPFC_FEATURECOUNTS_GRCh38_CQN.Rmd(27KB)
----individual-cohorts()
--------MSSM-Penn-Pitt_DLPFC_FEATURECOUNTS_GRCh38_CQN.Rmd(26KB)
--------meta_analysis()
--------HBCC_sgACC_FEATURECOUNTS_GRCh38_CQN.Rmd(28KB)
--------HBCC_dsACC_DE.Rmd(17KB)
--------split_by_analysis()
--------HBCC_STG_DE.Rmd(17KB)
--------MSSM-Penn-Pitt_ACC_FEATURECOUNTS_GRCh38_CQN.Rmd(26KB)
--------MSSM-Penn-Pitt_ACC_DE.Rmd(16KB)
--------MSSM-Penn-Pitt_DLPFC_DE.Rmd(16KB)
--------HBCC_sgACC_DE.Rmd(17KB)
--------graphics_t_statistics.Rmd(17KB)
--------HBCC_DLPFC_DE.Rmd(17KB)
--------HBCC_DLPFC_FEATURECOUNTS_GRCh38_CQN.Rmd(28KB)
--------HBCC_dsACC_FEATURECOUNTS_GRCh38_CQN.Rmd(28KB)
--------HBCC_STG_FEATURECOUNTS_GRCh38_CQN.Rmd(28KB)