图卷积网络(GCN)简单示例
# 导入必要的库
import torch
import torch.nn.functional as F
from torch_geometric.nn import GCNConv
from torch_geometric.datasets import Planetoid
import matplotlib.pyplot as plt
import networkx as nx
from torch_geometric.utils import to_networkx
# 1. 加载数据集(使用Cora数据集,这是一个引用网络数据集)
dataset = Planetoid(root='/tmp/Cora', name='Cora')
data = dataset[0] # 获取图数据
# 2. 定义GCN模型
class GCN(torch.nn.Module):
def __init__(self):
super(GCN, self).__init__()
# 定义两层GCN卷积层
self.conv1 = GCNConv(dataset.num_node_features, 16)
self.conv2 = GCNConv(16, dataset.num_classes)
def forward(self, data):
x, edge_index = data.x, data.edge_index
# 第一层卷积+ReLU激活函数
x = self.conv1(x, edge_index)
x = F.relu(x)
# 第二层卷积+Softmax输出
x = self.conv2(x, edge_index)
return F.log_softmax(x, dim=1)
# 3. 初始化模型和优化器
model = GCN()
optimizer = torch.optim.Adam(model.parameters(), lr=0.01, weight_decay=5e-4)
# 4. 定义绘制节点图函数
def plot_graph(data, color_map=None, title="Graph"):
# 将数据转换为NetworkX图
G = to_networkx(data, to_undirected=True)
plt.figure(figsize=(8, 8))
# 绘制图,并为节点上色
nx.draw(G, pos=nx.spring_layout(G), with_labels=False, node_color=color_map,
node_size=50, cmap="coolwarm")
plt.title(title)
plt.show()
# 使用真实标签颜色绘制原始图
color_map = data.y.numpy()
plot_graph(data, color_map, title="Original Graph with True Labels")
# 5. 训练模型
model.train()
for epoch in range(200):
optimizer.zero_grad()
out = model(data)
# 计算交叉熵损失
loss = F.nll_loss(out[data.train_mask], data.y[data.train_mask])
loss.backward()
optimizer.step()
if epoch % 20 == 0:
print(f'Epoch {epoch}, Loss: {loss.item()}')
# 6. 评估模型,并可视化预测结果
model.eval()
_, pred = model(data).max(dim=1)
# 使用预测标签颜色绘制图
pred_color_map = pred.numpy() # 使用预测标签作为颜色映射
plot_graph(data, pred_color_map, title="Graph with Predicted Labels")
# 计算并输出准确率
correct = (pred[data.test_mask] == data.y[data.test_mask]).sum()
accuracy = int(correct) / int(data.test_mask.sum())
print(f'Accuracy: {accuracy:.4f}')