MySQL:在“查询结束”步骤上挂起的更新/插入/删除查询非常慢

时间:2022-02-20 22:13:12

I have a large and heavy loaded mysql database which performs quite fast at times, but some times get terribly slow. All tables are InnoDB, server has 32GB of RAM and database size is about 40GB.

我有一个庞大而繁重的mysql数据库,有时执行得非常快,但有时会变得非常慢。所有表都是InnoDB,服务器有32GB的RAM,数据库大小约为40GB。

Top 20 queries in my slow_query_log are update, insert and delete queries and I cannot understand why they are so slow (up to 120 seconds sometimes!)

我的slow_query_log中的前20个查询是更新,插入和删除查询,我无法理解为什么它们如此慢(有时长达120秒!)

Here is the most frequent query:

这是最常见的查询:

UPDATE comment_fallows set comment_cnt_new = 0 WHERE user_id = 1;

Profiling results:

分析结果:

mysql> set profiling = 1;
Query OK, 0 rows affected (0.00 sec)

mysql> update comment_fallows set comment_cnt_new = 0 where user_id = 1;
Query OK, 0 rows affected (2.77 sec)
Rows matched: 18  Changed: 0  Warnings: 0

mysql> show profile for query 1;
+---------------------------+----------+
| Status                    | Duration |
+---------------------------+----------+
| starting                  | 0.000021 |
| checking permissions      | 0.000004 |
| Opening tables            | 0.000010 |
| System lock               | 0.000004 |
| init                      | 0.000041 |
| Searching rows for update | 0.000084 |
| Updating                  | 0.000055 |
| end                       | 0.000010 |
| query end                 | 2.766245 |
| closing tables            | 0.000007 |
| freeing items             | 0.000013 |
| logging slow query        | 0.000003 |
| cleaning up               | 0.000002 |
+---------------------------+----------+
13 rows in set (0.00 sec)

I am using master/server replication, so the binary log is enabled. I've fallowed one advice I've found on the internet and set flush_log_at_trx_commit to 0 but it did not make any difference:

我正在使用主/服务器复制,因此启用了二进制日志。我已经在互联网上找到了一条建议,并将flush_log_at_trx_commit设置为0,但它没有任何区别:

mysql> show variables like '%trx%';
+-------------------------------------------+-------+
| Variable_name                             | Value |
+-------------------------------------------+-------+
| innodb_flush_log_at_trx_commit            | 0     |
| innodb_use_global_flush_log_at_trx_commit | ON    |
+-------------------------------------------+-------+

The table structure:

表结构:

CREATE TABLE `comment_fallows` (
  `id` int(11) NOT NULL AUTO_INCREMENT,
  `user_id` int(11) NOT NULL,
  `part_id` int(11) DEFAULT NULL,
  `article_id` int(11) DEFAULT NULL,
  `request_id` int(11) DEFAULT NULL,
  `comment_cnt` int(10) unsigned NOT NULL,
  `comment_cnt_new` int(10) unsigned NOT NULL DEFAULT '0',
  `last_comment_date` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP,
  PRIMARY KEY (`id`),
  KEY `user_id` (`user_id`,`last_comment_date`),
  KEY `part_id` (`part_id`),
  KEY `last_comment_date` (`last_comment_date`),
  KEY `request_id` (`request_id`),
  CONSTRAINT `comment_fallows_ibfk_1` FOREIGN KEY (`user_id`) REFERENCES `users` (`id`) ON DELETE CASCADE,
  CONSTRAINT `comment_fallows_ibfk_2` FOREIGN KEY (`part_id`) REFERENCES `fanfic_parts` (`id`) ON DELETE CASCADE,
  CONSTRAINT `comment_fallows_ibfk_3` FOREIGN KEY (`request_id`) REFERENCES `requests` (`id`) ON DELETE CASCADE
) ENGINE=InnoDB AUTO_INCREMENT=2239419 DEFAULT CHARSET=utf8

And all the innodb settings (server has 32 GB of RAM):

所有的innodb设置(服务器有32 GB的RAM):

mysql> show variables like '%innodb%';
+-------------------------------------------+------------------------+
| Variable_name                             | Value                  |
+-------------------------------------------+------------------------+
| have_innodb                               | YES                    |
| ignore_builtin_innodb                     | OFF                    |
| innodb_adaptive_flushing                  | ON                     |
| innodb_adaptive_flushing_method           | estimate               |
| innodb_adaptive_hash_index                | ON                     |
| innodb_adaptive_hash_index_partitions     | 1                      |
| innodb_additional_mem_pool_size           | 16777216               |
| innodb_autoextend_increment               | 8                      |
| innodb_autoinc_lock_mode                  | 1                      |
| innodb_blocking_buffer_pool_restore       | OFF                    |
| innodb_buffer_pool_instances              | 1                      |
| innodb_buffer_pool_restore_at_startup     | 0                      |
| innodb_buffer_pool_shm_checksum           | ON                     |
| innodb_buffer_pool_shm_key                | 0                      |
| innodb_buffer_pool_size                   | 21474836480            |
| innodb_change_buffering                   | all                    |
| innodb_checkpoint_age_target              | 0                      |
| innodb_checksums                          | ON                     |
| innodb_commit_concurrency                 | 0                      |
| innodb_concurrency_tickets                | 500                    |
| innodb_corrupt_table_action               | assert                 |
| innodb_data_file_path                     | ibdata1:10M:autoextend |
| innodb_data_home_dir                      |                        |
| innodb_dict_size_limit                    | 0                      |
| innodb_doublewrite                        | ON                     |
| innodb_doublewrite_file                   |                        |
| innodb_fake_changes                       | OFF                    |
| innodb_fast_checksum                      | OFF                    |
| innodb_fast_shutdown                      | 1                      |
| innodb_file_format                        | Antelope               |
| innodb_file_format_check                  | ON                     |
| innodb_file_format_max                    | Antelope               |
| innodb_file_per_table                     | ON                     |
| innodb_flush_log_at_trx_commit            | 0                      |
| innodb_flush_method                       |                        |
| innodb_flush_neighbor_pages               | area                   |
| innodb_force_load_corrupted               | OFF                    |
| innodb_force_recovery                     | 0                      |
| innodb_ibuf_accel_rate                    | 100                    |
| innodb_ibuf_active_contract               | 1                      |
| innodb_ibuf_max_size                      | 10737401856            |
| innodb_import_table_from_xtrabackup       | 0                      |
| innodb_io_capacity                        | 10000                  |
| innodb_kill_idle_transaction              | 0                      |
| innodb_large_prefix                       | OFF                    |
| innodb_lazy_drop_table                    | 0                      |
| innodb_lock_wait_timeout                  | 120                    |
| innodb_locks_unsafe_for_binlog            | OFF                    |
| innodb_log_block_size                     | 512                    |
| innodb_log_buffer_size                    | 8388608                |
| innodb_log_file_size                      | 268435456              |
| innodb_log_files_in_group                 | 3                      |
| innodb_log_group_home_dir                 | ./                     |
| innodb_max_dirty_pages_pct                | 90                     |
| innodb_max_purge_lag                      | 0                      |
| innodb_mirrored_log_groups                | 1                      |
| innodb_old_blocks_pct                     | 37                     |
| innodb_old_blocks_time                    | 0                      |
| innodb_open_files                         | 300                    |
| innodb_page_size                          | 16384                  |
| innodb_purge_batch_size                   | 20                     |
| innodb_purge_threads                      | 1                      |
| innodb_random_read_ahead                  | OFF                    |
| innodb_read_ahead                         | linear                 |
| innodb_read_ahead_threshold               | 56                     |
| innodb_read_io_threads                    | 8                      |
| innodb_recovery_stats                     | OFF                    |
| innodb_recovery_update_relay_log          | OFF                    |
| innodb_replication_delay                  | 0                      |
| innodb_rollback_on_timeout                | OFF                    |
| innodb_rollback_segments                  | 128                    |
| innodb_show_locks_held                    | 10                     |
| innodb_show_verbose_locks                 | 0                      |
| innodb_spin_wait_delay                    | 6                      |
| innodb_stats_auto_update                  | 1                      |
| innodb_stats_method                       | nulls_equal            |
| innodb_stats_on_metadata                  | ON                     |
| innodb_stats_sample_pages                 | 8                      |
| innodb_stats_update_need_lock             | 1                      |
| innodb_strict_mode                        | OFF                    |
| innodb_support_xa                         | ON                     |
| innodb_sync_spin_loops                    | 30                     |
| innodb_table_locks                        | ON                     |
| innodb_thread_concurrency                 | 16                     |
| innodb_thread_concurrency_timer_based     | OFF                    |
| innodb_thread_sleep_delay                 | 10000                  |
| innodb_use_global_flush_log_at_trx_commit | ON                     |
| innodb_use_native_aio                     | ON                     |
| innodb_use_sys_malloc                     | ON                     |
| innodb_use_sys_stats_table                | OFF                    |
| innodb_version                            | 1.1.8-rel25.1          |
| innodb_write_io_threads                   | 8                      |
+-------------------------------------------+------------------------+
92 rows in set (0.00 sec)

I've been struggling with this problem for weeks and would be very greatfull for any advice on how to solve this problem.

几个星期以来,我一直在努力解决这个问题,对于如何解决这个问题的任何建议都非常有用。

Why could my update, insert and delete queries be so slow on query end step?

为什么我的更新,插入和删除查询在查询结束步骤上会如此慢?

update

更新

I have disabled query cache, but update, insert and delete queries are still very very slow (nothing changed)

我已禁用查询缓存,但更新,插入和删除查询仍然非常慢(没有任何更改)

show variables like '%cache%';
+------------------------------+----------------------+
| Variable_name                | Value                |
+------------------------------+----------------------+
| binlog_cache_size            | 4194304              |
| binlog_stmt_cache_size       | 32768                |
| have_query_cache             | YES                  |
| key_cache_age_threshold      | 300                  |
| key_cache_block_size         | 1024                 |
| key_cache_division_limit     | 100                  |
| max_binlog_cache_size        | 18446744073709547520 |
| max_binlog_stmt_cache_size   | 18446744073709547520 |
| metadata_locks_cache_size    | 1024                 |
| query_cache_limit            | 16777216             |
| query_cache_min_res_unit     | 4096                 |
| query_cache_size             | 0                    |
| query_cache_strip_comments   | OFF                  |
| query_cache_type             | ON                   |
| query_cache_wlock_invalidate | OFF                  |
| stored_program_cache         | 256                  |
| table_definition_cache       | 400                  |
| table_open_cache             | 2048                 |
| thread_cache_size            | 8                    |
+------------------------------+----------------------+

6 个解决方案

#1


13  

Try setting values:

尝试设置值:

innodb_flush_log_at_trx_commit=2
innodb_flush_method=O_DIRECT (for non-windows machine)
innodb_buffer_pool_size=25GB (currently it is close to 21GB)
innodb_doublewrite=0
innodb_support_xa=0
innodb_thread_concurrency=0...1000 (try different values, beginning with 200)

References:

参考文献:

MySQL docs for description of different variables.

MySQL文档用于描述不同的变量。

MySQL Server Setting Tuning

MySQL服务器设置调整

MySQL Performance Optimization basics

MySQL性能优化基础知识

Hope it helps...

希望能帮助到你...

#2


3  

There appears to be a bug with how MySQL handles the query cache which causes similar behaviour (see http://bugs.mysql.com/bug.php?id=28382).

MySQL处理查询缓存的方式似乎存在一个错误,导致类似的行为(请参阅http://bugs.mysql.com/bug.php?id=28382)。

What is basically happening is that the cache needs to be updated following any query that modifies data (INSERT, UPDATE, DELETE). With a large cache it is taking a long time to do this, if the cache is smaller then its faster.

基本上发生的是在任何修改数据的查询(INSERT,UPDATE,DELETE)之后需要更新缓存。使用大缓存需要很长时间才能完成此操作,如果缓存小于其速度则更快。

So the work-around until the engine is fixed is to decrease the cache size.

因此,在引擎修复之前的解决方法是减小缓存大小。

#3


1  

It may be a problem of hardware if you are using DELL server. I resolved this command.

如果您使用的是DELL服务器,则可能是硬件问题。我解决了这个命令。

/opt/dell/srvadmin/bin/omconfig storage vdisk action=changepolicy controller=0 vdisk=0 writepolicy=fwb

/ opt / dell / srvadmin / bin / omconfig storage vdisk action = changepolicy controller = 0 vdisk = 0 writepolicy = fwb

#4


0  

Try starting tuning your innodb_buffer_pool_instances according the innodb_buffer_pool_size

尝试根据innodb_buffer_pool_size开始调整innodb_buffer_pool_instances

Firs of all I think you can increase significantly your innodb_buffer_pool_size...

首先,我认为你可以大大增加你的innodb_buffer_pool_size ......

innodb_buffer_pool_instances sysvar

innodb_buffer_pool_instances sysvar

The size in bytes of the memory buffer InnoDB uses to cache data and indexes of its tables. The default value is 128MB, increased from a historical default of 8MB. The maximum value depends on the CPU architecture, 32-bit or 64-bit. For 32-bit systems, the CPU architecture and operating system sometimes impose a lower practical maximum size.

内存缓冲区InnoDB的大小(以字节为单位)用于缓存其表的数据和索引。默认值为128MB,从历史默认值8MB增加。最大值取决于CPU架构,32位或64位。对于32位系统,CPU架构和操作系统有时会降低实际最大尺寸。

The larger you set this value, the less disk I/O is needed to access data in tables. On a dedicated database server, you may set this to up to 80% of the machine physical memory size. Be prepared to scale back this value if these other issues occur...

设置此值越大,访问表中数据所需的磁盘I / O就越少。在专用数据库服务器上,您可以将其设置为最多80%的计算机物理内存大小。如果出现其他问题,请准备好缩减此值...

Then you can tune the innodb_buffer_pool_instances, using multiple buffer pools was very important, yuo can read a good test case here:

然后你可以调整innodb_buffer_pool_instances,使用多个缓冲池非常重要,yuo可以在这里读取一个好的测试用例:

MySQL Workload test

MySQL工作负载测试

#5


0  

I have the problem in our test environment(Not set up by DBA).Finally I find there is one conf in my.cnf : sync_binlog=1. I change this conf to 0,and it works. You can have a try.

我在测试环境中遇到了问题(不是由DBA设置的)。最后我发现my.cnf中有一个conf:sync_binlog = 1。我将此conf更改为0,它可以工作。你可以尝试一下。

#6


0  

It is probably due to slow disk writes.

这可能是由于磁盘写入速度慢。

In our case it was because Debian GNU/Linux running mysqld was virtualised in Hyper-V, and even if it was given SSD storage hdparm -t was giving terrible results (10-20MB/s instead of 600MB/s that it gets on raw hardware)

在我们的例子中,是因为运行mysqld的Debian GNU / Linux在Hyper-V中被虚拟化,即使它被给予SSD存储hdparm -t也给出了可怕的结果(10-20MB / s而不是600MB / s,它是原始的硬件)

#1


13  

Try setting values:

尝试设置值:

innodb_flush_log_at_trx_commit=2
innodb_flush_method=O_DIRECT (for non-windows machine)
innodb_buffer_pool_size=25GB (currently it is close to 21GB)
innodb_doublewrite=0
innodb_support_xa=0
innodb_thread_concurrency=0...1000 (try different values, beginning with 200)

References:

参考文献:

MySQL docs for description of different variables.

MySQL文档用于描述不同的变量。

MySQL Server Setting Tuning

MySQL服务器设置调整

MySQL Performance Optimization basics

MySQL性能优化基础知识

Hope it helps...

希望能帮助到你...

#2


3  

There appears to be a bug with how MySQL handles the query cache which causes similar behaviour (see http://bugs.mysql.com/bug.php?id=28382).

MySQL处理查询缓存的方式似乎存在一个错误,导致类似的行为(请参阅http://bugs.mysql.com/bug.php?id=28382)。

What is basically happening is that the cache needs to be updated following any query that modifies data (INSERT, UPDATE, DELETE). With a large cache it is taking a long time to do this, if the cache is smaller then its faster.

基本上发生的是在任何修改数据的查询(INSERT,UPDATE,DELETE)之后需要更新缓存。使用大缓存需要很长时间才能完成此操作,如果缓存小于其速度则更快。

So the work-around until the engine is fixed is to decrease the cache size.

因此,在引擎修复之前的解决方法是减小缓存大小。

#3


1  

It may be a problem of hardware if you are using DELL server. I resolved this command.

如果您使用的是DELL服务器,则可能是硬件问题。我解决了这个命令。

/opt/dell/srvadmin/bin/omconfig storage vdisk action=changepolicy controller=0 vdisk=0 writepolicy=fwb

/ opt / dell / srvadmin / bin / omconfig storage vdisk action = changepolicy controller = 0 vdisk = 0 writepolicy = fwb

#4


0  

Try starting tuning your innodb_buffer_pool_instances according the innodb_buffer_pool_size

尝试根据innodb_buffer_pool_size开始调整innodb_buffer_pool_instances

Firs of all I think you can increase significantly your innodb_buffer_pool_size...

首先,我认为你可以大大增加你的innodb_buffer_pool_size ......

innodb_buffer_pool_instances sysvar

innodb_buffer_pool_instances sysvar

The size in bytes of the memory buffer InnoDB uses to cache data and indexes of its tables. The default value is 128MB, increased from a historical default of 8MB. The maximum value depends on the CPU architecture, 32-bit or 64-bit. For 32-bit systems, the CPU architecture and operating system sometimes impose a lower practical maximum size.

内存缓冲区InnoDB的大小(以字节为单位)用于缓存其表的数据和索引。默认值为128MB,从历史默认值8MB增加。最大值取决于CPU架构,32位或64位。对于32位系统,CPU架构和操作系统有时会降低实际最大尺寸。

The larger you set this value, the less disk I/O is needed to access data in tables. On a dedicated database server, you may set this to up to 80% of the machine physical memory size. Be prepared to scale back this value if these other issues occur...

设置此值越大,访问表中数据所需的磁盘I / O就越少。在专用数据库服务器上,您可以将其设置为最多80%的计算机物理内存大小。如果出现其他问题,请准备好缩减此值...

Then you can tune the innodb_buffer_pool_instances, using multiple buffer pools was very important, yuo can read a good test case here:

然后你可以调整innodb_buffer_pool_instances,使用多个缓冲池非常重要,yuo可以在这里读取一个好的测试用例:

MySQL Workload test

MySQL工作负载测试

#5


0  

I have the problem in our test environment(Not set up by DBA).Finally I find there is one conf in my.cnf : sync_binlog=1. I change this conf to 0,and it works. You can have a try.

我在测试环境中遇到了问题(不是由DBA设置的)。最后我发现my.cnf中有一个conf:sync_binlog = 1。我将此conf更改为0,它可以工作。你可以尝试一下。

#6


0  

It is probably due to slow disk writes.

这可能是由于磁盘写入速度慢。

In our case it was because Debian GNU/Linux running mysqld was virtualised in Hyper-V, and even if it was given SSD storage hdparm -t was giving terrible results (10-20MB/s instead of 600MB/s that it gets on raw hardware)

在我们的例子中,是因为运行mysqld的Debian GNU / Linux在Hyper-V中被虚拟化,即使它被给予SSD存储hdparm -t也给出了可怕的结果(10-20MB / s而不是600MB / s,它是原始的硬件)