在Windows / Linux中为Mac创建包

I have trying hard to make a r package myself. I followed the instruction in previous question in * on how to develop package for layman. Here are the steps I tool following the previous question.

我一直在努力自己做一个r包。我遵循了*上关于如何为外行开发包的问题。下面是我在前面的问题中使用的步骤。

Run R code in fresh R session

在新的R会话中运行R代码

# random DNA function
randDNA = function(n){
paste(sample(c("A", "C", "T", "G"), n, replace = TRUE), collapse = "")
}
# DNA to RNA function
dna2rna <- function(inputStr) {
  if (!is.character(inputStr))
    stop("need character input")
  is = toupper(inputStr)
  chartr("T", "U", is)
}

# complementary sequence function
compSeq <-  function(inputStr){
 chartr("ACTG", "TGAC", inputStr)
 }

# example data
dnaseq1 <- c("ATTGTATCTGGGTATTTCCCTTAATTGGGGCCTTT")
dnaseq2 <- c("TGGGGTAAACCCGGTTTAAAATATATATATTTTT")
myseqdata <- data.frame(dnaseq1, dnaseq2)
save(myseqdata, file = "myseqdata.RData")

Install Rtools Install R package utils

安装Rtools安装程序包

Pefrom the following task in R

在R中完成以下任务

require(utils)
package.skeleton(list = c("randDNA","dna2rna", "compSeq", "myseqdata"), 
name = "dnatool",environment = .GlobalEnv, path = "c:", force = FALSE)

Edit system environment variable path to following in windows 7

在windows 7中编辑系统环境变量路径
```
C:\Rtools\bin;C:\Rtools\perl\bin;C:\Rtools\MinGW\bin; 
C:\Program Files\R\R-2.14.2\bin\x64; 
```
(type >path in command line to check if the path is properly set.

(在命令行中键入>路径，检查路径是否设置正确。
Copy the folder dnatool in step (3) and put in new folder named rpackage, Now change directory to this folder (in DOS)

复制步骤(3)中的文件夹dnatool，并放入名为rpackage的新文件夹，现在将目录更改为该文件夹(在DOS中)
```
c: \ repackage>  R CMD build dnatool 
c: \ repackage>  Rcmd build dnatool 
```
Edit: I am sometime getting dnatool.zip but other times dnatool.tar.gx

编辑:我有时会喝*醇。zip但是其他时间是dnatol .tar.gx
Checking package in command line (DOS)

在命令行中检查包(DOS)
```
c: \ repackage> R CMD check dnatool
```

I was able to pack it as "dnatool.zip" in windows.

我可以把它包装成“dnatool”。在windows zip”。

How can compile for MAC or unix source ? What steps are different ?

如何为MAC或unix源代码编译?哪些步骤是不同的?

Unix source:     dnatool.tar.gz
Mac OS X binary: dnatool.tgz

Do I need Mac computer to do. I do have linux virtualbox and installed ubuntu in it ?

我需要Mac电脑吗?我有linux virtualbox并在里面安装了ubuntu ?

Edit:

编辑:

Should I use the following commad to get sourcode binary from step (3) folder dnatool ?

我是否应该使用下面的commad从步骤(3)文件夹dnatool获得源代码二进制文件?

$ tar -zcvf dnatool.tar.gz/home/dnatool

1 个解决方案

#1

The package that was created using R CMD build can be installed on other OS types. Even if your package contains source code other than R (c or c++) this is the case. Only when you create a binary distribution (I think by adding --binary to the r cmd build call) the package becomes platform specific. The tools needed to build packages are often already installed under linux or mac. So if you create a source distribution, it should work under all the major distributions. To create a mac binary, you need either a mac, or create a cross-compiler environment. The second option could be quite a challenge, I say you could give to a google. Do note that if you upload your package to CRAN, all building of packages is done for you.

使用R CMD构建创建的包可以安装在其他OS类型上。即使您的包包含除R (c或c++)之外的源代码，也是如此。只有当您创建一个二进制发行版(我认为是通过向r cmd构建调用添加二进制)时，包才会成为特定于平台的。构建包所需的工具通常已经安装在linux或mac下，所以如果您创建了一个源分布，那么它应该在所有主要的发行版下面工作。要创建一个mac二进制文件，您需要一个mac，或者创建一个跨编译环境。第二个选择可能是一个相当大的挑战，我说你可以给一个谷歌。请注意，如果您将包上传到CRAN，那么所有构建包的工作都是为您完成的。

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在Windows / Linux中为Mac创建包

1 个解决方案

#1

#1

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